YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|51464049
Protein type:	Globular with Signal Peptide
Type Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLRAGSRPC AAAPGPTAWL GRSHCRRRAE CLAWPQPSGH LALVLRCWER EQARELPGSC  60
   61 CLHTEGDCSL GAQAAEHGLG GLQNACAPGL WAPLVVPPAP LFLCRSLEQL EWPLCSPADK 120
  121 PTLCIWTCKI VEKGLYNLSS RGIRQRTFHL SFNMGKGNED PYLHCSSIQC STDQPPFQQI 180
  181 SFTGKGSDEK KPFKGKGKTA SSHSSEKHIQ RQGNCPEEER SLMLKKKKKS KSSTAVHYSE 240
  241 IQEICQCGAG NNWAKGRYTE DTELMESVMD VVRKEAESCD CLQGFQLTHS LGGGTGSGMG 300
  301 TLLISKIREE YPDRIINTFS ILPSPKRVSE QFTAMFRCKA FLYWYTGEGM DEMEFTEAES 360
  361 NMNDLVSEYQ QYQDATAEEE EDEEYAEEEV A

Type	Start	End	Confidence
Signal Peptide	1	25	0.57
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	391	0.99