YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|51460993
Protein type:	Transmembrane
Type Confidence:	0.65
Topology Confidence:	0.49
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRALDVLPM KEEDVLKFLA AGTHLGDTNF DFQMEQYIYK MKSDGIYILN QKKTWEKLLL  60
   61 AACAIVAIEN PADVSVISSR KTGQKATPLF AAVTGATLVA GCFTPRTFSN QISAAFREPQ 120
  121 LLVVTDPRAD HQPLTEARSR LPLAPTKGSG GTRPGRNPRR LLGALPPAGV QAQELALESP 180
  181 VSFWLVAAEL NPRMALAWHR ILAVGGSVGT RLLFQGATQT PFPRSHPDPQ KAVPVETQVN 240
  241 GMKNDAILYE SFQTAAKNSN SSPIGPRPPG TQ

Type	Start	End	Confidence
Cytoplasmic	1	85	0.57
Transmembrane Helix	86	104	0.49
Non-Cytoplasmic	105	272	0.81