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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|51460530
Protein type: Transmembrane
Type Confidence: 0.67
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERTKAKTVS FPGSPKALAS AQTRLRPWES VVGTENDVAL PLAANVSHRA RHLCGRRLAC  60
   61 RMLSCQGHAA CPPLPGRGDL LSNSPVAMEE GLSGGRQEHR EERDTLASSQ ESQSTTEAKT 120
  121 GPSRASSRTS LRALKAKCFR IQHGRQESCG EAALQDSRGK PQRGEDLGLR GPWMILREDG 180
  181 GCIASRKGLS KAPKLEGSGA FWGSKESKLP AGQSINDEEA LDKTRMGEDR VDKPTGSLIH 240
  241 TAFLILPDKL APLVSCYQTS ALKSLRCPRT SALRTTMARF PQVLRADGEL ASVPGPQPWA 300
  301 SKARRPRRSS PCHAPTRAAP ATATRRRCPL SISPPAPTRD PGLSARRAGC GSVNARPDGL 360
  361 GGPGEPRARV PVSVAWSGLR ALGLSAVAAR VPALGSVGPG PQGRDVLAWG RSAGLGAGVG 420
  421 RRWLLGQVAS ALPGEGGDAL PACGQPSRRR GWRPRASLGC LGPPAEKPVV VPGLWNQAAD 480
  481 AVRWRALARA PRDADGLDIR CSNTVSSMNC VEVTEEGDRA PHLTRKSMEM SGPVQEFPEK 540
  541 FCETVQSREN QVVNAAVALF SEKVPKTAEN FHALNFHAFM ERTDLVIRVP AFTEIFQGFM 600
  601 CQGGDFTYHN DTGGKSIYRE KFDDENFILK HTGPGILSMA NAGPNMNGSQ FFICTAKTEW 660
  661 LDGKHVVFGK VKEGMKIMEA MERFGRLCQV QILPVLCSFV GSSPHISEDC LMQVLEDLGQ 720
  721 CWAHFALSTV EGQKKRITIP EACQSGAEPE LESQQPRRGK SIEDRQEEGM GGPSGSLGLG 780
  781 APGESPGHAI RVPAPPSFPL SPVGLYLPGI PQQTALPSCE LNSLACLGAE PVLTGNVAKV 840
  841 EKRVVRAFGA EETDVSEEVL WECEVVSMLG VCRLCICPHQ ARCSEGGIDG PEFVPSSRPS 900
  901 FVMCPFFPHG CGGRPVHPAV GFSPVLNSNR GRVVREAWTP AVMNNMVSPH TETQAACVAG 960
  961 TGGPTSACGD PWPRPPSDHC TCVPSCSLLP SDPHGLRIVY PIRTIPQPFQ SCLQLELAHL1020
 1021 VAVPRSPVSS PSLLRPHRSR HCFLLPEILT ACSPAPGARV SAECLLDLVL AAFGSGAISA1080
 1081 PSHVHPFPEM ALLRPICQRG LWGLAVMEPW RGAAGLSVDS GVGGPRRKAW MVLPAAVQGR1140
 1141 ALQGNSGATR GVCCVLPSRE NRVWTVSAEG LGVLTWAGLG ICMGRNVGEL SHSAASGCVF1200
 1201 RCPPACEAWD LKAHFPPVML RGRGAPPAVW PVPLLVAEHP WVSERFSAPA KSRQPLRGWI1260
 1261 SMPEAWVSTS KRAPRAAQIK ADESQVWICW AALVVSSTKP QVRIQRCEAG RGALTILRVS1320
 1321 GQVKQLSSFK SNRFQAASQQ RQSFDISSGK LDRQLKSSCP QCDKYRGKQV CNSEHKWRNM1380
 1381 KQVHHDGSTG LVGAFISPLG ANPATFPLTF MCVSEVTVFI SVLSLECRQE TSSRTIWLPG1440
 1441 DAHALLSVGG HRGFRILGTN PELARDGRRK ASCWVREGEL ENKTAQRQFG SHGIPAPTRG1500
 1501 KEKIEDVFFT EASSPWMHLW GPDPSTEPQP NPQPYTGIIW DSGPFPAWCP AAAPHLSINR1560
 1561 AADPQPALST SVSASGLSSC FLSILLVPIA FFLPKGHFAA SGYTPWKYSV LGKKFFAQIL1620
 1621 GTLAAWTGLG LLVFFTPASE NPCTHPQPLL FDSSHVAHPP ASAYWTRGRY LASGYSSIGW1680
 1681 QQHRPVAISV SVVQLTLALH YCSILVLMKR QCSFRRPPAR VTAPPGIVSG PGLRGLTPQN1740
 1741 RLRLMAVDAY LVGTGRRCRL ILAPDSTPAV LPPLLVFTYE PNPGVAAELA SAALLLPQPE1800
 1801 LQPVTYGMTS DELSFQHGHP CVLHSARTAL LSLRGHERGS LGSKEDSGLP AAAVLLNLER1860
 1861 GMQKEHSPGT SSLSPILLPP ERYVFPQKGP IIDVQVEEPV SAKELKDKDP SSSLFDHSGP1920
 1921 SGVLKAVSFL FVAAEITLGH LKGLQPQPRG AAGNSLHQSI TSWDHVAQQP SPLFQEPPAL1980
 1981 PFLVPAMKIH LELQTADFLA DFLEFKQLIG KGLGSGPSSR LANQQVLQGP HPCLPWHWGG2040
 2041 HRGISEQISA YKASQFDLGY VHNRMARIRR VDGGYSCIRL SAPCLPCGVG YMQEVSWEGT2100
 2101 ASRGFPKGIP CGHAEGHAEG LPGKAVAQAL LASSACRRKD KGLLHGTLGG EGSCVAAPGP2160
 2161 TCPDVIVLLW PGAGTKLPPD ATQPPFWPHL AMASHVPDIR GPAAIVSSEA WMLGPNWEEE2220
 2221 DVTGDVTCGP CSPYKRCEPE RTKSPRLPSA TSVRDLNGTT KAQWKPRRPL TMEAAQSISN2280
 2281 KSAAFPLGLF HNDPPQTRTR STGAMPGSYS KELTFPVHRQ HRLTGKEKKY SGLQCAWLEA2340
 2341 EWRRWELVKG MGSPRTLCTQ GSTQGGTQAP ASGALWDVHR QAQETGQPGL QIMRPGVESR2400
 2401 GYYECPHLRE AFLFGLSQND LFLCSITDAN FCSSPSSRLP SLLLSVSPAT LSCPFPATAG2460
 2461 PSSVCLKAFG LDPQQGDYLS SFVSSLLPRS QPLSAIQEAK IVTETSIPNT QKSVPVALWG2520
 2521 VEARERSFLQ RRGRLLPEPS ESLTWTNYKL LSPGELNLED DLIAATWAFH QGHLGKEPAP2580
 2581 LPGHSGEAEA AVSEKEAKPE KGDAAILITR FRAWGHLGSQ NAWILGPNPG LLTRQILGCL2640
 2641 EILVDAAHLG SDPGPCSRCC WKLLAAKQQD LVRALFPCEK PPRPTEMSRH HSRFERDYRV2700
 2701 GWDRREWSVN GTHGTTSICS VTSGAGGGTA SSLSVRPGLL PLPVVPSRLP TPATAPAPCT2760
 2761 TGSSEAITSL VASSASAVTT KRTQDLSPQL ASGMSAPGHS RFFQKRWLQP WEWQQRPTCV2820
 2821 AEWNVENSVA KALAWPWAEL VLHRAGCSEP LRQPESWRAG PLAMAVVGRP SVPILLPHRA2880
 2881 GAVQAAFASA GHSELPPRSP LGAVSVKVAR EVKGGEPQPG HCEVAVVLES RAPGVLRLCL2940
 2941 LVFKTPFQPC FPLITGQPLD LLATSGRRSA GPAVGHMENG SRWNRLLGAP GILLSVASLN3000
 3001 VNTRTQLSTT TLLCVSGSVF LSEGNPLTHC SSSAGSELPG RPQVYCQAQW AGQALKKEGC3060
 3061 GGHQSRGGAF LWSISLAPQR AEPKLGASST SYPVALSGKT LNLVPGEHAL CASLPARQRR3120
 3121 CSFLISTASA YVCPLSDERW QIFPPQTPSA SLLGIRLTVA SGLPVLVALI PPPKGPKAVT3180
 3181 AVSQRVCPAR FELLYKRALG KHSEIQQLPW LGVWRVGGPA PVHLQRQPRR IRIGCSYRPH3240
 3241 QPAVWIVSAT GKVTAFPVMY CFFRDSVGRP GREREPRVLE APKTASVVIL TVRKQVSNKV3300
 3301 AEDVVSGLLC GVKSRALSRL HALGVSVVSH TAEVLQSSLR ISNLKITKAP RNGRCVMCVC3360
 3361 ESTADPGEGG GGPGVTARRA GSWKMSYQRP EQGLPLPCPP PRPLWRHDWR GSPCSGGRCL3420
 3421 VTNAAVTRNR QGGGASEQDG PLQGTRLLGE RVTVGTPEVL ALRTWGPKLE ETPTSSPGGR3480
 3481 GCSRAPGISK GDSQSQGLAT SIRWGQTPIN QSTPWDTDEP PSKQMRESDN PGTGPWVTTV3540
 3541 AAGNQPTLIA HSYGVAQPPT FSPAVNVQAP VIGVTPSLPP HVGPQLPLMP GHYSLPQPPS3600
 3601 QPLSSVVVNM PAQALYASPQ PLAVSTLPGV GQVARPGPTA VGNGHMAGPL LPPPPPAQPS3660
 3661 ATLPSGAPAT NGPPTTDSAH GLQMLRTIGV GKYEFTDPGH PRGKSCCHVP PHGPASAPPC3720
 3721 AVTATPPGQG VLHASSFTGL PNPEAAVEPP PAQDNWPEMG EGGGRCGGRD KQSGKMRRGK3780
 3781 KRKEGRACKA QSPSPSSPSP GHSHLQPPRP GQAAKGAQAM NAAISTPAFF GKQFLVAQRM3840
 3841 YGDLLKPQAP GLVGLSVSRG IQLDNQGARD TAGARSSMAT SIDGTKRILW LLQTKQPRLQ3900
 3901 AERIDYHLTM SEPGKRKDAA EAAGPPRDGV ILGAGGQKPC SGPSCLTGPE VPLPMGMRGL3960
 3961 FRREPRVGTF PSWGLQVMVL TRGRKPAALI PAAVFLQEQQ APADTGRVTR EVPDQELYRD4020
 4021 KPSICMGRTG PALKPLQACP CGARCQPLGS EQHIPPGALW DRRRQMKASF EEAMRWEMLA4080
 4081 RRSGIECRGR GTHTDMLTQR KGDFGLWELK PQPHCLAPLK LLGRSEGLGT RSPQERPVRP4140
 4141 RVSVTSRFSG QNSEAPASAW KSALTRAKAA CPPWESQVWA YQGSQPPSLD PLQLPNGNQS4200
 4201 FHMRSCQKQV FKPRQRGLRR QENSRKGNTL SQQELVLIAK KGQGAQITVP TAPSSPGSSL4260
 4261 LGVQPLPCGR WQLGPTWKLQ GFPSLFPAVS ERVAGGRRRF KVLGFPYRAL LLAAPRYSQP4320
 4321 PNPAAEDECY GGSPPRLPYA PALEPLGPRG LGRGCLCPAG EGGGDASTRA APRLRRHVCR4380
 4381 GGDHREVPGP AEVARLRAPI CICPVFHKEE GSTHGCAQGW HVGEGQSFKT AACHGTDPRL4440
 4441 IGRANHQPAR RLRGQSLPFP SKGDALSPLS LFPQPQSDGS HRESPKQPRK AEEVKGQPER4500
 4501 QHPPREGASL GLHSRVWEPR EPGSGTAGAA LFITEAELSR KAVAHGDGPP SVWLPCHPQS4560
 4561 ASEHSGRCPA HLELRPPEPR AAAEYTGLAP PAQDSNSWVT VSIGFVKTGP WYYHRICSLI4620
 4621 QLLTVGTYVH TELRAPLGQE LSCSPLAPAS AALTSPQLQV SARCPVPCGH LMICFGCLPT4680
 4681 AWEIQTRALG WVWEKLLTSP GLEPMGPGTV CASPRSKTPG TEMLKELNQQ RRAKAFTDLK4740
 4741 IVVEGREFEV HQNVLASCSL YFKDLIQRFA FLPAVVGLSG ADAEPGLCSE GGQDLCFPMP4800
 4801 CLDLPTNPGV TVFCFRMDPW LASPLRSGLS HRAQLPCGQA LAGHMPALSL AGRGRLFGTS4860
 4861 HLMDTSGLLP PVLGLSLSKH RVPLASVTLE TYCAVAGLAQ CRAMALPFDP KQWLHAQAAA4920
 4921 LFHRTEWEFK SLTGSSLSKH TGAPPGAGAH TKHQLSPQSG GDTLQTGKET SRDDASETCG4980
 4981 PRAWLWGRVI QRGSLERWHL MWVMKNGHCP GRQVGKSKVE RREGVSGPTG DSTLLQGRPH5040
 5041 HDLMGQQHPK PFTPWGPVGQ DKKWLGAGTE QPPVEDAALV SDQGHPSRGC PLWGPCSERR5100
 5101 GLRSTGVQSQ DSLMSRDTEA PPPPHSSAGH ARRPVWMRTV CVACSLAGHL DSPTASRRCA5160
 5161 QGTRHKHLAL WPPEKRVSGP QRSFPSHVAR PSPRQDRAQG GKQGYSEEPG WGGQADGLRG5220
 5221 RLRTPNAAGV FTPAVTYTPD INRFIYLCPS PAPPSSPARR TLYTQATLTS DPVFHVAGGP5280
 5281 APGQAPGHGC WLSVQDSGQG GREKLELVLS NLQADVLELL LEFVYTGSLV IDSANAKTLL5340
 5341 EAASKFQFHT FCKVCVSFLE KQLTASNCLG VLAMAEAMQC SELYHMAKAF ALQIFPEVAA5400
 5401 QEEILSISKD DFIAYVSNDS LNTKAEELVY ETVIKWIKKD PATRTQYAAE LLAVVRLPFI5460
 5461 HPSYLLNVVD NEELIKSSEA CRDLVNEAKR YHMLPHARQE MQTPRTRPRL SAGMKGHAPN5520
 5521 LPRSSVLGSV VPVRCQAQMP TVLECVPRAP IHVPAGVAEV IVLVGGRQMV GMTQRSLVAV5580
 5581 TCWNPQNNKW YPLASLPFYD REFFSVVSAG DNIYLSGGME SGVTLADVWC YMSLLDNWNL5640
 5641 VSRMTVPRCR HNSLVYDGKI YTLGGLGVAG NVDHVERVLE QFSKTRGCLY GPSLGGKALL5700
 5701 LAVKVQHGHS VRHHHQPMGG GGPLPKAVHS AAATVCGGKI YVFGGVNEAG RAAGVLQSYV5760
 5761 PQTNTWSFIE SPMIDNKYAP AVTLNGFVFI LGGAYARATT IYDPEKGNIK AGPNMNHSRQ5820
 5821 FCSAVVLDGK IYATGGIVSS EGPALGNMEA YEPTTNTWTL LPHMPCPVFR HGCVVIKKYI5880
 5881 QSG

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