YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|37788368, gi\|...
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.92
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWYLLLPTAL LLTVSSGVGA GLQKAVVNLD PEWVRVLEED CVILRCQGTF SPEDNSTKWF  60
   61 HNKSLISHQD ANYVIQSARV KDSGMYRCQT AFSALSDPVQ LDVHADWLLL QTTKRLFQEG 120
  121 DPIRLRCHSW RNTPVFKVTY LQNGKGKKYF HRNSELSISK ATHADSGSYF CRGIIGRNNI 180
  181 SSASLQISIG DPTSPSSFLP WHQITFCLLI GLLFAIDTVL YFSVQRSLQS SVAVYEEPKL 240
  241 HWSKEPQDK

Type	Start	End	Confidence
Signal Peptide	1	20	0.98
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	200	0.99
Transmembrane Helix	201	222	0.86
Cytoplasmic	223	249	0.89