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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|46485393, gi|...
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKSLWDSLC NMSQDREPIV ESFHFVCTLA LIVGSMTQFS DELESVVDYS NKNLTHVPKD  60
   61 LSPSTKSLSL SQNSISDLQM SDISFLSELR VLRLSHNRIR RLDFGVFLLN RDLEYLDVSH 120
  121 NQLQNISCCP MVNLKHLDLS FNDFEVLPVY KEFGNLRKLS FLGLSAAKFR QLDLLPISHL 180
  181 HLSCVLLDLV NYQIKDGETE SLQVPNTNVL HLVFHPNSLF SVQVNISVNA LGCLQLSNIK 240
  241 LNDENCQSLI IFLSELTRGP TLLNLTLQHI ETNWKCFVRL LQFLWPRPVE YLNIYNLTIT 300
  301 ESISRETFIY VETVLKSLKI EHVTNQVFLF VKDALYSVFA EMNIRMLTLS DTPFIHMVCP 360
  361 EFPSTFAFLN FTQNVFTDSI FQGCSTLKRL ETLILQRNGL KNLFKVALMT KTMSSLETLD 420
  421 VSLNSLNSHV YDRTCAWAES IRVLNLSSNV LSDSVFRCLP PKVKVLDLHN NRIVSIPKDV 480
  481 THLQALQELN VASNFLTDLP GCGAFSSLSV LVIDHNSVSH PSSDFFQSCQ NIRSITAGNN 540
  541 PFRCTCELRE FVKNIGQASR EVVEGWPDSY RCDYPDSIKG TPLQDFHMSP LSCDTILLTV 600
  601 TIGATLLLLA AIGASLCLYF DLPWYLRMLW QWTQTRHRAR NIPLEELQRN LQFHAFVSYS 660
  661 EHDSAWVKNE LLPNLEKDDI RVCLHERNFV PGKSIVENII HFIEKSYKSI FVLSPHFIQS 720
  721 EWCHYELYFA HHNLFHEGSD NLILILLEPI QQNNIPSRYH KLRALMAQRT YLEWPIEKGK 780
  781 RGLFWANLRA SFIMKLALVN ENDVKT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle