YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|40385889, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGMAQKSQTL GWVTSILLLQ MAIAERPRWT LNGKPRVFLD LSAYEIKIVK DFLMDKKELQ  60
   61 LQSSETPTLG KNSVYLIEML LPDKEDVLEF LDKGKRFPVR EARVVIFFGA QEHPKVTEFA 120
  121 VGPLPTPIYM REISPGPGHN PSWASRPISK AEYRLIHSIL IEAMKPLHQF LLDTTDYSLE 180
  181 DNVKDALTFT FMAPHGTKSD QRRSWFMLQR FMASHSLQPI GLEILLDHGS TDVQHWKVEQ 240
  241 LWYNGKAYDS PEDLAQKYAR GEVSITVLME SVAEDTEQPP VFSFSSDAEE LPTSISMARP 300
  301 RVSVSHVPAY TIEDNMVFYR DWIFSFRLRP SSGLQLLNVH FQGVRIAYEV SVQEAVAHFG 360
  361 GHISAGTQTK YMDVGWGPDC ATHQLVPGTD CPDTATFLEV IHHYDTDKPV SYPQALCLFE 420
  421 MPAGHHFNSN FREDFNSSAG TNGRKLVLRT ISTVHHYDYI WDFMFYPNGV MKAKMHATGL 480
  481 IHATFYQPKE MRYVSQSQTH LFSNIHTHLV HYRIDLDVAG TKNSFQTLQI IWENINNSKK 540
  541 QRHPVLGNTL KKTYYSQEHQ AAFHFGKPLP NYLIFSNLHT SHLGPRSRYH LQIHSKIHQV 600
  601 QLPGYQKKRG VSWTRYPLAV TEYQDDEKCS SSIYTQNNPW NPPVVFEDFI QNDTNIEDKD 660
  661 LVAWVTVGFR NIPRSEDSAN MTTPKSSAGF VLQPINLPGF 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle