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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CHDH_RAT
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWQVLRSWSK RCLSPRGALA WAAQGQPRPP CSCAVASAAS GGKDEYTFIV VGAGSAGCVL  60
   61 ANRLTEDPNH RVLLLEAGPK DLLMGSKRLQ WKIHMPAALV ANLCDDKYNW YYHTEAQPGL 120
  121 DGRVLYWPRG RVWGGSSSLN AMVYIRGHAE DYNRWHRQGA EGWDYAHCLP YFRKAQKHEL 180
  181 GANMYRGGDG PLHVSRGKTN HPLHQAFLQA ARQAGYPFTE DMNGFQQEGF GWMDMTIHQG 240
  241 KRWSTASAYL RPALSRPNLR AEVQTLVSRV LFEGTRAVGV EYIKDGQSHK AYVSREVILS 300
  301 GGAINSPQLL MLSGVGNADD LKKLGIPVVC HLPGVGQNLQ DHLEIYIQHA CTQPITLHSA 360
  361 QKPLRKVCIG LEWLWRFTGD GATAHLETGG FIRSRPGVPH PDIQFHFLPS QVIDHGRKPT 420
  421 QQEAYQVHVG TMRATSVGWL KLRSTNPQDH PMINPNYLST ETDVEDFRQC VKLTREIFAQ 480
  481 EAFAPFRGKE LQPGSHVQSD KEIDAFVRAK ADSAYHPSCT CKMGQPSDPT AVVDQQTRVI 540
  541 GVENLRVIDA SIMPSVVSGN LNAPTIMIAE KAADVIKGCP ALGDENVPVY KPQTLDTQR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle