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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|40786505, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTGSLAPGV RAGGGNTGWL WMSSCNLGLP VLSISFLIWL LLAAPGAQAA GYKTCPTTKP  60
   61 GMLNVHLLPH THDDVGWLKT VDQYYYGIMS DVQHASVQYI LDSVIYSLLN DPTRRFIYVE 120
  121 MAFFSRWWKQ QTNVTQDAVR NLVRQGRLEF VNGGWVMNDE AATHYGAIVD QMTLGLRFLQ 180
  181 DTFGSDGLPR VAWHIDPFGH SREQASLFAQ MGFDGFFLGR IDYQDKFNRK RKLKMEELWR 240
  241 ASASLKPPAA DLFTGVLPNN YNPPKDLCWD VLCTDPPVVD DPTSPEFNAN KLVDYFLNLA 300
  301 SSQKKYYRTN HTVMTMGSDF QYENANMWFK NMDKLIRLVN EQQANGSKVH VLYSTPSCYL 360
  361 WELNKANLTW TVKEDDFFPY ADGPHMFWTG YFSSRPALKR YERLSYNFLQ VCNQLEALVG 420
  421 PEAKVGPYGS GDSAPLNEAM AVLQHHDAVT GTARQNVVND YAKQLAAGWG PCEVLVSNAL 480
  481 ARLSLYKQNF SFCREINISI CPASQTSEHF RVIIYNPVGR KVDLMVRLPV SEGIFLVKDP 540
  541 NDRRISSNVV MVPSAYSKTY QWELLFPASV PALGFSIYSV NKMSGHNHQA HNLTARPKKS 600
  601 KSRVLVIENK YIRATFDSDT GLLRKIENLE QNISLPVRQG FFWYNASAGD EESPQASGAY 660
  661 IFRPSHRKPL PVSHWAQVTL VKTNLVQEVH QNFSAWCSQV IRLYEGQRHL ELEWTVGPIP 720
  721 VKDDWGKEVI SRFNTPMRTR GQFFTDSNGR EILKRRDDFR PTWTLNQTEP VAGNYYPVNT 780
  781 RIYITDGHMQ LTVLTDRSQG GSSLLDGSLE LMVHRRLLVD DERGVAEPLL ETDTGDKVRG 840
  841 RHLVILSSVS DAAARHRLLA EQEVLAPQVV LAHGGSSPYH SQAPKMQFSA LRRELPPQVH 900
  901 LLTLARWGPK MLLLRLEHQF AVKEDSNRNL SSPVTLNLQN LFKTFTINYL QETTLAANQP 960
  961 LSRVSRLKWM TDTGPISYPA PSRLDPTSIT LQPMQIRTFL ASVQWQRLI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle