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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: LYAG_RAT
Protein type: Globular with Signal Peptide
Type Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNIRKPLCSN SVVGACTLVS LTTAVILGHL MLRELMLLPQ DLHESSSGLW KTYRPHHQES  60
   61 YEPAPLHIQE HAEQLRAVPT QCDVTPNSRF DCAPDKGITQ EQCEARGCCW VPAGQVLNGP 120
  121 VMGQPWCFFP PSYPSYRLEN LSSTESGYTA TLTRTSPTFF PKDVLTLQLE VLMETDSRLH 180
  181 FMIKDPTSKR YEVPLETPRV LSQAPSPLYS VEFSEEPFGV IVRRKLGGRV LLNTTVAPLF 240
  241 FADQFLQLST SLPSQHIAGL GEHLSPLMLS TEWTRITLWN RDVAPSQGVN LYGSHPFYLA 300
  301 LEDGGLAHGV FLLNSNAMDV VLQPSPALTW RSTGGILDVY VFLGPEPKSV VQQYLDVVGY 360
  361 PFMPPYWGLG FHLCRWGYSS TAIVRQVVEN MTRTHFPLDV QWNDLDYMDA RRDFTFNQDG 420
  421 FADFPDMVHE LHQGGRRYMM IVDPAISSSG PAGSYRPYDE GLRRGVFITN ETGQPLIGKV 480
  481 WPGSTAFPDF TNPETLDWWQ DMVSEFHAQV PFDGMWIDMN EPSNFIRGSQ QGCPDNELEN 540
  541 PPYVPGVVGG ALQAATICAS SHQFLSTHYN LHNLYGLTEA IASSRALVKT RGTRPFVISR 600
  601 STFAGHGRYA GHWTGDVWSS WEHLAYSVPE ILQFNLLGVP LVGADICGFQ GNTTEELCVR 660
  661 WTQLGAFYPF MRNHNDLNSL PQEPYRFSET AQQAMRKAFT LRYALLPYLY TLFHGAHVKG 720
  721 DTVARPLFLE FPEDPSTWSV DRQLLWGPAL LITPVLEPGK TDVTGYFPKG MWYNLQMVPV 780
  781 ETLGSLPSSS PASSFRSIVH SKGQWLTLEA PLDTINVHLR AGYIIPLQGP SLTTTESRKQ 840
  841 PMALAVALTE SGEASGELFW DDGESLGVLE RGAYTLVTFS AKNNTIVNKL VHVTKEGGEL 900
  901 QLREVTILGV TTAPTQVLSN GISVSNFTYS PDDKSLSIPV SLLMGERFQI DWS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle