YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|40018596, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHCRVFRGLA GALFTLLCVG LLSLRYHSSL SLRTMQGTLR LNQPNPGHLE LQLGDIFIGV  60
   61 KTTWAFHRSR LDLLLDTWVS RTRQQTFIFT DSPDELLQER LGSHLVVTNC SAEHSHPALS 120
  121 CKMAAEFDAF LVSGLRWFCH VDDDNYVNPK ALLQLLRTFP QDHDVYVGKP SLNRPIHASE 180
  181 LQSKNRTRLV RFWFATGGAG FCINRQLALK MVPWASGSHF VDTSALIRLP DDCTVGYIIE 240
  241 CKLGGRLQPS PLFHSHLETL QLLGTAQLLE QVTLSYGVFE GKLNIIKLPG PFSHEEDPSR 300
  301 FRSLHCLLYP DTPWCPLLAV P

Type	Start	End	Confidence
Signal Peptide	1	31	0.83
N-region	1	22
H-region	23	28
C-region	29	31
Cleavage Site	31	32
Non-Cytoplasmic	32	321	0.95