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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: UGGG1_RAT
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLLIALALL CLFSLAEANS KAITTSLTTK WFSAPLLLEA SEFLAEDSQE KFWSFVEASQ  60
   61 NIGSSDQHDT DRSYYDAILE AAFRFLSPLQ QNLLKFCLSL RSYSASIQAF QQIAVDEPPP 120
  121 EGCKSFLSVH GKQTCDLGTL ESLLLTAPDR PKPLLFKGDH RYPSSNPESP VVIFYSEIGH 180
  181 EEFSNIHHQL ISKSNEGKIN YVFRHYISNP RKEPVHLSGY GVELAIKSTE YKAKDDTQVK 240
  241 GTEVNTTVIG ENDPIDEVQG FLFGKLRELY PSLEGQLKEF RKHLVESTNE MAPLKVWQLQ 300
  301 DLSFQTAARI LAAPVELALV VMKDISQNFP TKARAITKTA VSAQLRAEVE ENQKYFKGTI 360
  361 GLQPGDSALF INGLHIDLDT QDIFSLFDTL RNEARVMEGL HRLGIEGLSL HNILKLNIQP 420
  421 SETDYAVDIR SPAISWVNNL EVDSRYNSWP SSLQELLRPT FPGVIRQIRK NLHNMVFIVD 480
  481 PVHETTAELV SIAEMFLSNH IPLRIGFIFV VNDSEDVDGM QDAGVAVLRA YNYVGQEVDG 540
  541 YHAFQTLTQI YNKVRTGEKV KVEHVVSVLE KKYPYVEVNS ILGIDSAYDQ NRKEARGYYE 600
  601 QTGVGPLPVV LFNGMPFEKE QLDPDELETI TMHKILETTT FFQRAVYLGE LSHDQDVVEY 660
  661 IMNQPNVVPR INSRILTAKR EYLDLTASNN FYVDDFARFS ALDSRGKTAA IANSMNYLTK 720
  721 KGMSSKEIYD DSFIRPVTFW IVGDFDSPSG RQLLYDAIKH QKTSNNVRIS MINNPSREIS 780
  781 DSSTPVSRAI WAALQTQTSN SAKNFITKMV KEETAEALAA GVDIGEFSVG GMDVSLFKEV 840
  841 FESSRMDFIL SHALYCRDVL KLKKGQRVVI SNGRIIGPLE DSELFNQDDF HLLENIILKT 900
  901 SGQKIKSHIQ QLRVEEDVAS DLVMKVDALL SAQPKGEARI EYQFFEDKHS AIKLKPKEGE 960
  961 TYYDVVAVVD PVTREAQRLA PLLLVLAQLI NMSLRVFMNC QSKLSDMPLK SFYRYVLEPE1020
 1021 ISFTADNSFA KGPIAKFLDM PQSPLFTLNL NTPESWMVES VRTPYDLDNI YLEEVDSIVA1080
 1081 AEYELEYLLL EGHCYDITTG QPPRGLQFTL GTSANPTTVD TIVMANLGYF QLKANPGAWI1140
 1141 LRLRKGRSDD IYRIYSHDGT DSPPDANDVV VILNNFKSKI IKVKVQKKAD MANEDLLSDG1200
 1201 TNENESGFWD SFKWGFSGQK TEEVKQDKDD IINIFSVASG HLYERFLRIM MLSVLKNTKT1260
 1261 PVKFWFLKNY LSPTFKEFIP YMAKKYNFQY ELVQYKWPRW LHQQTEKQRI IWGYKILFLD1320
 1321 VLFPLVVDKF LFVDADQIVR TDLKELRDFN LDGAPYGYTP FCDSRREMDG YRFWKSGYWA1380
 1381 SHLAGRKYHI SALYVVDLKK FRKIAAGDRL RGQYQGLSQD PNSLSNLDQD LPNNMIHQVP1440
 1441 IKSLPQEWLW CETWCDDASK KRAKTIDLCN NPMTKEPKLE AAVRIVPEWQ DYDQEIKQLQ1500
 1501 TLFQEEKELG TLHEEETQEG SQKHEEL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle