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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: MIRO2_RAT
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRDVRILLL GEAQVGKTSL ILSLVGEEFP EEVPARAEEI TIPADVTPEK VPTHIVDYSE  60
   61 AEQTEEELQE EIHKANVVCV VYDVSEEATI EKIRTKWIPL VNGRTATGPR LPIILVGNKS 120
  121 DLRPGSTIEA VLPIMSQFPE IETCVECSAK HLRNISELFY YAQKAVLHPT APLYDPEAKQ 180
  181 LRPACAQALT RIFRLSDQDL DHALSDKELN AFQKSCFGHP LAPQALEDVK RVVCKNVAGG 240
  241 VQDDRLTLEG FLFLNTLFIQ RGRHETTWTI LRRFGYSDSL ELTPDYLCPP LYVPPGCSTE 300
  301 LNHRGYQFVQ RVFEKHDQDH DGVLSPTELE SLFSVFSVAP WGPELLHTVP TEAGCLSLRG 360
  361 YLCQWTLVTY LDVQHCLAHL GYLGYPTLCE QDSQAQAITV TREKRLDQEK GQTQRSVLMC 420
  421 KVLGARGVGK SAFLQAFLGH SLGEARDRDA PEKLPTHTIN TVRVSGQEKY LILCEVNADS 480
  481 LLDTSLDTTC DVACLMFDSS DPETFVQCAT IYKRYYMDGQ TPCLFISSKA DLPEGVAPPG 540
  541 LSPAEFCRRH RLPAPASFSC LGPAQSSIDV FTQLATMATF PHLAHTELHP TPFWLRGVLV 600
  601 AVGTAVAAVL SFSLYRVLVK SR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle