YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|42558277, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPQDNTFLC LVICLGQTIW AQEDFPIPII STATNPMVSW NESVRILCRG TPEAFLYQLS  60
   61 LMKNSTQTVI EKKLGFQKEA EFIINHMNST LAGCYQCQYR KKNHWSEQSK PLKLVVTGLY 120
  121 DKPVLSTDQS LVLLPGENVS FKCSSAHNLF NRFSLAKEGE ASLPLHQHKE SQGNFHLGPV 180
  181 NADFIGKYRC YGWHNNSPYV WSAPSDALEL IVSVTSLDSE KHDYVMENSI RIGMAGLVLV 240
  241 ILLVIVSEDW YSHRISHKEC CQERAAKRWS KQGVRPSDCR

Type	Start	End	Confidence
Signal Peptide	1	21	0.98
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	280	0.94