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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|32737583, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLQALWLFWI LMAVIGLSRE GHSAQASLSC DAAGVCDGSS RSFTSIPSGL TANTKKLDLS  60
   61 FNKITYIGHG DLRACVNLRV LTLESSGINT IEGDAFYSLG SLEHLDLSNN HLSSLSSSWF 120
  121 RPLSSLKYLN LMGNPYRTLG ETSLFSNLTN LQTLRVGNVD TFSEIRRIDF AGLTSLNELE 180
  181 IQVLSLGNYE SRSLQSIRDI YHLTLHLSES AFLLGIFADI LSSVRYLELR DTNLARFQFS 240
  241 ELSVDEINSP MKKLAFRNAD LTDKSFNELL KLLRYILELM EVEFDHCTLN GVGNFNPSES 300
  301 DVVRELGKVE TVTIRSLHIP QFYLFYDLST VYSLLEKVKR ITVENSKVFL VPCSFSQHLK 360
  361 SLEFLDLSEN LMVEEYLKNS ACEGGWPSLQ SLVLSQNHLR SIRKTAEILL TLKNLTALDI 420
  421 SKNSFQPMPD SCQWPGKMRF LNLSSTGIQA VKTCIPQTLE VLDVSNNNLD SFSLFLPRLQ 480
  481 ELYISRNKLK TLPEASLFPV LQVMKIRENA ISTFSKDQLG SFPKLETLEA GDNHFICSCE 540
  541 LLSFILERPA LVHVLVDWPD SYLCDSPPRL HGQRLQDARP SVLECHQAAL VSGVCCALLL 600
  601 LILLLGALCY HFHGLWYLRM MWAWLRAKRK PKKAPCRDLC YDAFVSYSEQ DSYWVENLMV 660
  661 QQLENSDPPF KLCLHKRDFV PGKWIIDNII DSIEKSHKTV FVLSENFVRS EWCKYELDFS 720
  721 HFRLFDENND AAILVLLEPI EKKAIPQRFC KLRKIMNTKT YLEWPLDEGQ REVFWANLRT 780
  781 AIKS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle