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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|41386751, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMGFSRGIVF LLLLYLLQGS DTSLVKLNEN GYEDIIIAID PAVSEDVTII DQIKDMVTKA  60
   61 SAYLFEATEK RFFFKNVSIL IPENWTNSDQ YRRPKQESYK HADIKVAPPA LQGRDEPYTR 120
  121 QFTKCGKKAE YIHFTPDFVL GRKQKEYGDS GRLLVHEWAH LRWGVFDEYN EDQPFYSASS 180
  181 KKIEATRCST GIKGMNKAQV CQGGSCITRN CRRNSTTQLY EKDCQFFPDK VQTEKSSIMF 240
  241 MQSIDSVTEF CKKENHNREA PTLHNQKCDY RSTWEVISNS EDFKNSTPME MPPSPPFFSL 300
  301 LRISERIVCL VLDVSGSMGS YDRLNRMNQA AKFFLQQILE SRSWAGMVHF HSSATVKSEL 360
  361 IQINSDVERN QLLETLPTSA SGGTSICSGI RTAFQVFKNK GYQTGGNDIL LLSDGEDSTA 420
  421 KDCLDEVKDS GAVVHFIALG KAFDQSISNM ANVTGGKQLF ATDEAQNNGL IDAFGALASE 480
  481 NADVTEKSLQ LESKGAVLTN SRWLNDTVVI DSTVGKDTYF LVTWSQQAPA IHLRDPKGTQ 540
  541 ITNFTIDTAS KMAYLTIPGI AEVGVWTYNL EAKVDSEILT ITVTSRASRP SVPPIIVNAK 600
  601 VNTDTNSFPS PMIVYAEVLQ GYTPIIGARV TATIESNSGK TEELVLLDNG AGADAFKDDG 660
  661 VYSRYFTAYS DNGRYSVKVR ADGGTNSARR SSRHPSSRAA YIPGWVVDGE IQGNPPRPET 720
  721 TEDTQPVLEN FSRTASGGAF VMSKVPALPL PDQYPPNQIT DLQATLDGEK ISLTWTAPGD 780
  781 DFDVGRVQQY IIRTSENIID LRDNFNKSLQ VNTTHLIPKE ANSKETFAFK PETISGENAT 840
  841 YIFIAIESVD KSNLHSGLSN IAQVALFTPQ ADPVPEESPQ SGVSITTIVL SVVGAVVLVC 900
  901 IIVSTTVCIL KRKRSSSGPA TTF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle