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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|41056215, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAWSGNKAAV VLCMDVGVAM GNSFPGEESP LEQAKKVMTM FVQRQVFSES KDEIALVLYG  60
   61 TESTDNALAG KDQYQNITVH RHLMLPDFDL LEDIGNKIQP SSQQADFLDA LIVCMDLIQR 120
  121 ETIGKKFGKK HIEVFTDLSS PFSQDQLDII ICNLKKSGIS LQFFLPFPID KNGEPGETED 180
  181 HDSSFDHCAP SFPQKGLTEQ QKEGIHMVTR VMLSLEGKDG LDEIYSFSES LQQLCIFKKI 240
  241 ERRSLPWPCQ LTIGPNLSIR IVAYKSIVQE KFKKSWVVVD ARTLKKEDIQ KETVYCLNDD 300
  301 DETEVSKEDT IQGFRYGSDI IPFSKVDEEQ MKYKSEGKCF SVLGFCKSSQ VHRRFFMGHQ 360
  361 VLKVFAAKDD EAAAVALSSL VHALDELNMV AIVRYAYDKR ANPQVGVAFP FIKDAYECLV 420
  421 YVQLPFMEDL RQYMFSSLKN NKKCTPTEAQ LSAIDDLIDS MSLVKKNEEE DIIEDLFPTS 480
  481 KIPNPEFQRL YQCLLHRALH LQERLPPIQQ HILNMLDPPT EMKAKCEIPL SKVKTLFPLT 540
  541 EVVKKKDQVT AQDVFQDNIE EGPAAKKYKT EKEEGHISIS SLAEGNVTKV GSVNPVENFR 600
  601 VLVRQKIASF EEASLQLMSH IEQFLDTNET LYFMKSMDRI KALREEAIQF SEEQRFNSFL 660
  661 EGLREKVEIK QLNHFWEIVV QDGITLITKD ESPGSSVTAE EATKFLTPKD KAKEDTTGLE 720
  721 EGGDVDDLLD MI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle