YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SMAGP_RAT
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNNLPATPSP EELMTTPVFQ APETMSPQAE EASTALIAVV ITVVFLTLLS VVTLIFFYLY  60
   61 KNKGSYVTYE PAEGEPSAIL QMETDSAKGK EKEEYFI

Type	Start	End	Confidence
Non-Cytoplasmic	1	34	0.53
Transmembrane Helix	35	59	0.91
Cytoplasmic	60	97	0.53