YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	AL5AP_RAT
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDQEAVGNVV LLAIVTLISV VQNAFFAHKV ELESKAQSGR SFQRTGTLAF ERVYTANQNC  60
   61 VDAYPTFLVV LWTAGLLCSQ VPAAFAGLMY LFVRQKYFVG YLGERTQSTP GYIFGKRIIL 120
  121 FLFLMSLAGI LNHYLIFFFG SDFENYIRTI TTTISPLLLI P

Type	Start	End	Confidence
Cytoplasmic	1	6	0.80
Transmembrane Helix	7	27	0.84
Non-Cytoplasmic	28	70	0.86
Transmembrane Helix	71	93	0.92
Cytoplasmic	94	112	0.91
Transmembrane Helix	113	136	0.89
Non-Cytoplasmic	137	161	0.87