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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7441758, gi|2...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSPAPAHMW NIVLVLLSLL AVLPITTTEK NGIDIYSLTV DSRVSSRFAH TVVTSRVVNR  60
   61 ADTVQEATFQ VELPRKAFIT NFSMIIDGVT YPGLSKRRLK PEAIHCCCGR GESAGLVKTT 120
  121 GRKTEQFEVS VNVAPGSKTT FELIYQELLQ RRLGMYELLL KVRPEQLVKH LQMTSTSLSP 180
  181 QGISTLETES TFMTQELANA LTTSQNKTKA HIQFKPTLSQ QRKSQNEQDT VLDGDFTVRY 240
  241 DVDRSSTGGY LQIENGYFVH HFAPEDLPTM AKNVLFVIDK SGSMAGKKIQ QTREALIKIL 300
  301 KDLSTQDQFN IIVFSGEANQ WEQLLVQATE ENLNRAVDYA SKIPAQGGTN INKAVLSAVE 360
  361 LLDKSNQAEL LPSKSVSLII LLTDGEPTVG ETNPKIIQKN TQEAINGRYS LFCLGFGFDV 420
  421 NYPFLEKLAL DNGGLARRIY EDSDSALQLQ DFYQEVANPL LSSVTFEYPS NAVEDVTRYN 480
  481 FQHHFKGSEM VVAGKLRDQG PDVLLAKVSG QMHLQNITFQ TEASIAQQEK EFQGPKYIFH 540
  541 NFMERLWALL TIQQQLEQRI SASGAELEAL EAQVLNLSLK YNFVTPLTHM VVTKPEDQEQ 600
  601 FQVAEKPTEV DGGVWSILSA VQRHFKTPTT GSKLLTSRLR GNRFQTLSRL GDGLVGSRQY 660
  661 MPPPGLPGPP GLPGPPGPPG HPHFASSIDY GRQPSLGRVL DLPSLSSQDP AGPSLAMLPK 720
  721 VVEQEGTTPE ESPNPDHPRA PTIILPLPGS GVDQLCVDIL HSEKPMKLFV DINQGLEVVG 780
  781 KYEKNIGFSW IEVTILKPHL QVHATPERLV VTRGRKNSEY KWKKTLFSVL PGLKMTMDKT 840
  841 GLLQLSGPDK VTISLLSLDD PQRGLMLLLN DTHHFSNDIT GELGQFYQDI IWDDTKQTVR 900
  901 VLGIDYPATR ELKLSYQDGF PGTEISCWTV KI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle