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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|17224418, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTKIIIYIC IWATAWAIPV PQLVPLERDI VEKSADVPFL AHPGTAAQNE LHINNATNDD  60
   61 SPKGSELGRQ VHSNGGYERD RNGSESIAVG GKSSPTQPIL ANAQGNSAKE REDVETYGHD 120
  121 GIHAGGENST ANGIRGQVGI AENAEEAKES KVHGQPHQDT KTGLASDTSQ NGDATLVQEN 180
  181 EPQVAGSKNS TNHEVGTHGS GVAAQETTPQ REGEGSENQG AEVTPSIGEG AGLDNTEGSP 240
  241 SGNGIEEDED TGSGDGVGAD AGDGRESHDG TEGHEGQSSG GNNDNRGQGS VSTEDDDSKE 300
  301 QEGSPNGRGG DNTSSSEETG IEEGDGTQTT QDNQNLSPTE GGIISQAEAC PSGQSQNQGL 360
  361 ETEGSSTGNK SSITKESGKL SGSKDSNGHH GMELDKRNSP KQGESDKPQG AAEKSDTHNN 420
  421 MGHSRIGSSS NSDGHDSYDF DDESMQGDDP NSSDESNGSD GSDDANSESA IENGNHGDAS 480
  481 YTSDESSDNG SDSDSHAGED DSSDDTSDTD DSDSNGDDDS ESKDKDESDN SNHDNDSDSE 540
  541 SKSDSSDSDS DSSDSSDSSD SSDSSESSDS SDSSDSSDSS DSSDSSDSSD SSDSSDSDSS 600
  601 DSDSSDSSDS SDSSDSSDSS DSSDSSDSSD SSDSSNSDSS DSSDSSDSSD SSDSSDSSDS 660
  661 SDSSDSSDSS DSSESSDSSD SSDSSDSDSS DSSDSSDSSD SSDSSDSSDS SDSSDSSDSS 720
  721 DSDSSDSDSS DSSDSSDSSD SSDSSDSSDS SDSSDSSDSS NSDSSDSSDS SDSSDSSDSS 780
  781 DSSDSSDSSD SSDSSDSSDS SDSSDSSDSS DSSDSSDSSD SSDSSDSSDS SDSSDSNSSD 840
  841 SSDSSDSSDS SDSSDSSDSS DSSDSSDSSD SSNSSDSSDS SDSSDGDSSD GDSSDSDSSD 900
  901 SDSSNSSDSD SSDSSDSSSS DSSDSDSDSK DSTSDSSDDN SKSGNGNSDS DSDSDSDSEG 960
  961 SDSNHSTSDD 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle