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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: NILR1_RAT
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.97
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTFTCKALLC LGMTLGLWIT VLTEFLPRPI LRVQPDTVVS TQSKVIFFCE RSQGAELYCL  60
   61 YKKGNPRNPR CKEIRPKPGK KVEFFISKIE PYHAGHYHCY YQIHGQWSED SDALELVVTG 120
  121 VYDYNELRLS VLPSPVVTVG RNMTLHCISH SHYDKFILTK EDHKFTSSLD TQCIPPSGQC 180
  181 QALFVMGPMT SNHTGTFRCY GYYKHTPQLW SIPSEPLEIH ISGLSKKPSL LTHQGHILDP 240
  241 GVNLTLQCCS DINYDRFALY KVGGVDIMQH TSQQTDTGFS MTNFTLGYVH HSTGGQYRCY 300
  301 GAHNLSSEWS ASSDPLDILI TGPIQMSTLP PITSMPPDQL ESYVNALIGV SVAFLVFLFI 360
  361 LIFIILQRRH QRKFRKDGEE AQKEKELQYP TGAVEPISRD RDQQKRSNAA AATQEESVYA 420
  421 SVEDMETEDG VELDTWKPPE GDPQGETYAQ VKPSRLRRVE AIIPSAMSRE QLNTKYEQAE 480
  481 EGQEVDGQAT ESEEPQDVTY AQLCSRTLRQ GTAAPPLSQA GEAPEEPSVY AALATACPGA 540
  541 VPKDKEQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle