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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|16758250, gi|...
Protein type: Transmembrane
Type Confidence: 0.95
Topology Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHQMETSTMV QDNRVSRFII SIRAWAARHL HHEDPTPDSF LDRFHGAEPK EVSSQERNAQ  60
   61 PNPGGQEPPE GGKGRKKDPI VVDPSSNIYY RWLTAIALPV FYNWCLLVCR ACFDELQSEH 120
  121 LTLWLVLDYS ADALYVVDML VRARTGFLEQ GLMVRDTKRL WKHYTKTLHF KLDILSLIPT 180
  181 DLAYLKLGMN YPELRFNRLL RFSRLFEFFD RTETRTNYPN VFRIGNLVLY TLIIIHWNAC 240
  241 IYFAISKFIG FGTDSWVYPN TSKPEYGRLS RKYIYSLYWS TLTLTTIGET PPPVKDEEYL 300
  301 FVVIDFLVGV LIFATIVGNV GSMISNMNAS RAEFQAKIDS IKQYMQFRKV TKDLETRVIR 360
  361 WFDYLWANRK TVDEKEVLKN LPDKLKAEIA INVHLDTLKK VRIFQDCEAG LLVELVLKLR 420
  421 PAVFSPGDYI CKKGDIGREM YIIKEGKLAV VADDGVTQFV VLSDGSYFGE ISILNIKGSK 480
  481 SGNRRTANIR SIGYSDLFCL SKDDLMETLT EYPDAKRALE EKGRQILMKD NLIDDDLVTA 540
  541 RADARNIEEK VEYLESSLDG LQTRFARLLA EYSASQMKLK QRLSQLESQM TRRGHGFSPD 600
  601 RENSEDASKA D

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle