YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|157820051, gi...
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLFSDDFSTW EQRFQELIRE EKPGAKWTLH LDKNIVPDGA ALGWRQQQQT VVGRFQCSRC  60
   61 YRSWTSAQVK IVCHMFQDAG KTQGRVLMRI FGQRCQKCFG SQFESPEFST ESIERMLNNL 120
  121 VNYILQRYYG HRKIASILNA SLDEKVLLDG PHDTLNCEAC SLHPHGRCAV AQRVRPPRSP 180
  181 SPSPSPSPKS HSSSPSRSHP PLLQTEITGF RNRPFQEVRE PGEAASPLLV ILSVAALALI 240
  241 GFFIR

Type	Start	End	Confidence
Non-Cytoplasmic	1	223	0.80
Transmembrane Helix	224	244	0.93
Cytoplasmic	245	245	0.78