YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|27666100, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.79
Topology Confidence:	0.44
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVNDCFSLT YPHNPHPGDL IEVFRPCYQH WALYLGDGYV INIAPVDGIP SSFSSAKSVF  60
   61 STKALVKMQL LKDVVGNDTY RINNKYDTTY PPLPVEEVIQ RSEFAIGQEV TYDLLVNNCE 120
  121 HFVTLLRYGE GVSEQANRAI GTIGLVAAGI DIFTFLGLFP KRQGAKS

Type	Start	End	Confidence
Non-Cytoplasmic	1	138	0.67
Transmembrane Helix	139	159	0.74
Cytoplasmic	160	167	0.44