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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|32188232, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.45
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEVFENLTT THNVKLSNAW LDLLKSVFLS TPQDLPEIIL ILSLICTIGG ELIGMSGIFT  60
   61 LATIGLFLNS TSFKPGVEAF LLEFWNCLSF IGFLMVFTFI GLLIPAHTYL YISFSDVYYS 120
  121 LNIYFTLIVL RLLVFLLMSP ILSRLGHGFS WRWAFIMVWS EMKGTPNINM ALLLAYSDVS 180
  181 LGSERERSQI LFHGVSVCVI TLIVNRFILP MAVIKLGLRD VTSTKYKSVY YTFQHFQELT 240
  241 KSTAMALKFD KDLANADWNM VDKAIILQNP YALNQEETTE HQKVKCPDCN KEIDETLNIE 300
  301 AMELANRRLL SAQIASYQRQ YRNEILSQSA MQVLVGAAGS FGEKKGEYMS PENIKNYSES 360
  361 KKLLSFLRKL LLNWVYNTKK DKGVPSRYMF LHACHSIVFT NEFEYTGYIA VLMNTYPMII 420
  421 CWISRLKDIY QYEIKCANYY FLTFYILEAL LKVAAMRKEF FSHTWLLFEL GITLVGILDI 480
  481 ILIETDSISY KFDLTETVVF MNVVRLLRIL RILKLITPKL LQVIDKRMSQ QISFRYAILK 540
  541 GYVQGEMDVL NIIDQIASSK QAKQILLKRV IRNMDHAMKE LGYLEYDHPE IAVTMKTKEE 600
  601 VNVMLNMARE IVKAFRSKGI IHKVEGAEIN KLIMAKKKQV LELQSVIQPL NVEEAPYYIP 660
  661 WLSEDPEAIS FIQLKRSKPH LEMDRVSSES EVAQTRSYTL PHTEYLLSGE IIGELNCLTK 720
  721 ERMQYSATCK TVVETYFIPI SHLYEGFEKK YPNMKYKMWQ KIGLAITAQK IRENLSFEDW 780
  781 NYKMQLKLCN VFVRDIPKTT KTDIYDETVT HVVLIHGSAE DCQLRKIYKA PFLIPVTCHQ 840
  841 IQGLEEFTKV MIIQTSVAVR KFRWNVKKYN PPRRISMKPD STE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle