YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|27690996, gi\|...
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.99
Topology Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTQALLALLL TLARILPGPL DAQEVHQSPR VVIASEGESI NITCSTRGDL EGLIMKRIWP  60
   61 QASNVIYFED ELEPTVDSAF SGRINFSGSQ KNLTIIMSLL QEADTGAYTC EAVRKVSVHG 120
  121 LFTTVVVKEK LSHEAYRSQE PLQTSVSLPA AIAVSFFLTG LILGVLCSML RKTQIKKLCA 180
  181 SGNKDSLCVV YEDMSCSNRK IPCTPNQYQ

Type	Start	End	Confidence
Signal Peptide	1	22	0.99
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	147	0.99
Transmembrane Helix	148	168	0.95
Cytoplasmic	169	209	0.97