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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109494025, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.72
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLAVVGAAAL VLVAGAPWML PVASGEDNLR PPEDVAIYII DDNYTLKWNH HRESMGNVTF  60
   61 SAEYQKGEGR IWLKVPKCQH ITRTKCEFSL LGINVYSKTQ FRVRAEEGNS TSSWNEADSF 120
  121 IPFYKAHVSP PRVHLKAEDK AILVYISPPG EDGTMWAQEK RCFNYTIRIW GRSFPVREIK 180
  181 PMYFPKKISK LLPETTYCLE VRAVHTSLQR HSNYSSARCI NTTVANKIPV PENLEVDVQG 240
  241 DSYVLKWDHA FANMTFKAQW IPVYSKSSPG NHSDKWKPIP TCANVQTTHC VSPRETFHTG 300
  301 TFFLRVQASD GNNTSFWSEE KLIDSQKYTL LPPPVIAVTP TGDSLLVYVS CKDSKCNGLI 360
  361 YEVIFWENTS NTEKRQHPQS MIKEHPEFNV VNLRPLTVYC VQARVLSTGV WNKTSKFSDK 420
  421 LCKKTHPGNS SVTWIITGFG ALLFSAMAFY AGRSLQKYLY YVFSPPLKPP CSIDEFFSEL 480
  481 PSKSLLLLTA EEHTERCFVI ENTGVVAGEE NRAPEEELRK YSSQSSQDSG NYSNEEEESV 540
  541 GPESGQDMLS TAPSGSPWSL PCPAGTLEDG ACFPGKEKHL QSPVLRTQPA LHG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle