YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	DCAKD_RAT
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFLVGLTGGI ASGKSSVIQV FQQLGCAVID VDVIARHIVQ PGCPAHRRIV EAFGTEVLLE  60
   61 NGDINRKVLG DLIFNQPDRR QLLNSITHPE IRKEMMKETF KYFLRGYRYV ILDIPLLFET 120
  121 KKLLKYMKHT VVVYCDRDTQ LARLMKRNNL NREDAEARIN SQLPLKDKAR MANHVLDNSG 180
  181 EWSLTRRQVI LLHAKLERSM EYLPLRLGFL TGLAGIASLL YLLTRYLLPS PQLGNPGSKP 240
  241

Type	Start	End	Confidence
Cytoplasmic	1	202	0.91
Transmembrane Helix	203	224	0.90
Non-Cytoplasmic	225	240	0.85