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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|53734204, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRASLLLSVL RPAGPVAVGI SLGFTLSLLS VTWVEEPCGP GPPQPGDSEL PPRGNTNAAR  60
   61 RPNSVQPGAE RERPGADESW EPRVLPYHPA QPGQATKKAV RTRYISTELG IRQKLLVAVL 120
  121 TSQATLPTLG VAVNRTLGHR LEHVVFLTGA RGRRTPSGMA VVALGEERPI GHLHLALRHL 180
  181 LEQHGDDFDW FFLVPDATYT EAHGLDRLTG HLSLASATHL YLGRPQDFIG GETTPGRYCH 240
  241 GGFGVLLSRT LLQQLRPHLE SCRNDIVSAR PDEWLGRCIL DATGIGCTGH HEGMHYNYLE 300
  301 LSPGEPVQEG DPRFRSALTA HPVHDPVHMY QLHKAFARAE LDRTYQEIQE LQWEIQNTSR 360
  361 LAADGERAST WPVGIPAPSR PASRFEVLRW DYFTEQHTFS CADGSPRCLL RGADQADVAD 420
  421 VLGTALEELN RRYQPALRLQ KQQLVNGYRR FDPARGMEYT LDLQLEALTP QGGRWPLTHR 480
  481 VQLLRPLSRV EILPVPYVTE ASRVTVLLPL AAAECDLASG FLEAFATAAL EPGDAAALTL 540
  541 LLLYEPRQAQ RAAHADVFAP VKAHVAELER RFPGARVPWL SVQTSAPSPL RLMDLLSKKH 600
  601 PLDTLFLLAG PDTVLTPDFL NRCRMHAISG WQAFFPMHFQ AFHPAVAPPQ GPGPPELGRD 660
  661 TGHFDRQAAS EACFYNSDYV AARGRLVAVS EQEEELLESL DVYELFLRFS SLHVLRAVEP 720
  721 ALLQRYRAQP CSARLSEDLY HRCRQSVLEG LGSRTQLAML LFEQEQGNST 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle