YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	C1QBP_RAT
Protein type:	Globular with Signal Peptide
Type Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPLLRCVPR ALGAAATGLR ASIPAPPLRH LLQPAPRPCL RPFGLLSVRA GSARRSGLLQ  60
   61 PPVPCACGCG ALHTEGDKAF VEFLTDEIKE EKKIQKHKSL PKMSGDWELE VNGTEAKLLR 120
  121 KVAGEKITVT FNINNSIPPT FDGEEEPSQG QKAEEQEPEL TSTPNFVVEV TKTDGKKTLV 180
  181 LDCHYPEDEI GHEDEAESDI FSIKEVSFQT TGDSEWRDTN YTLNTDSLDW ALYDHLMDFL 240
  241 ADRGVDNTFA DELVELSTAL EHQEYITFLE DLKSFVKSQ

Type	Start	End	Confidence
Signal Peptide	1	21	0.83
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	279	0.99