YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: QCR1_RAT
Protein type: Globular with Signal Peptide
Type Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASAVCRAA CSGTQALLRT CRSPALLRLP ALRGTATFVQ ALQSVPETQV SVLDNGLRVA  60
   61 SEQSSHPTCT VGVWIDVGSR YETEKNNGAG YFLEHLAFKG TKNRPGNALE KEVESIGAHL 120
  121 NAYSTREHTA YLIKALSKDL PKVVELLADI VQNISLEDSQ IEKERDVILR EMQENDASMQ 180
  181 NVVFDYLHAT AFQGTPLAQA VEGPSENVRR LSRTDLTDYL SRHYKAPRMV LAAAGGVKHQ 240
  241 QLLDLAQDHF SSVSQVYEED AVPSITPCRF TGSEIRHRDD ALPLAHVAIA VEGPGWANPD 300
  301 NVALQVANAI IGHYDCTYGG GVHLSSPLAS VAVANKLCQS FQTFNISYSE TGLLGAHFVC 360
  361 DAMSIDDMIF FLQGQWMRLC TSATESEVTR GKNILRNALI SHLDGTTPVC EDIGRSLLTY 420
  421 GRRIPLAEWE SRIEEVDAQM VREVCSKYFY DQCPAVAGYG PIEQLSDYNR IRSGMFWLRF 480
  481 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle