YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|34864996, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADINFKEVT LIVGVVAACY WNSLFCGFVF DDVSAILDNK DLHPSTPLKT LFQNDFWGTP  60
   61 MSEERSHKSY RPLTVLTFRL NYLLSELKPM SYHLLNTVFH AVVSVIFLKV CRLFLDKRGS 120
  121 VIAALLFAVH PIHTEAVTGV VGRAELLSSV FFLAAFLSYT KSKGPDNSIV WTPIALTVLL 180
  181 VAVATLCKEQ GITVVGICCV YEVFVAQGYT LPLLCAVAGQ FLRGKGSIPF SMLQTLIKLI 240
  241 VLMFSTLLLV VIRVQVIQSQ LPVFTRFDNP AAVSPTPTRQ LTFNYLLPVN AWLLLNPSEL 300
  301 CCDWTMGTIP LIESFLDVRN LATFAFFCFL GALGIFSLRY PGDSSKTVLM ALSLMALPFI 360
  361 PASNLFFPVG FVVAERVLYV PSMGFCILVA HGWQKISNKS VLKKLSWVCL SMVILTHALK 420
  421 TLHRNWDWES EYTLFMSALK VNKNNAKLWN NVGHALENEK NFEKALKYFL QATHVQPDDI 480
  481 GAHMNVGRTY KNLNRTKEAE ESYMLAKSLM PQIIPGKKYA ARIAPNHLNV YINLANLIRA 540
  541 NESRLEEADQ LYRQAISMRP DFKQAYISRG ELLLKMNKPL KAKEAYLKAL ELDRNNADLW 600
  601 YNLAIVYIEL KEPDEALKNF NRALELNSRH KLALFNSAIL MQESGEVKLR PEARKRLLNY 660
  661 INEEPQDANG YFNLGMLAMD DKKDSEAETW MKRAIKLQPD FRSALFNLAL LYSQTAKELK 720
  721 ALPILEELLR YYPDHTKGLI LKGDILMNQK KDIAGAKKCF EKILEMDPSN VQGKHNLCVV 780
  781 YFEEKDLLKA ERCLVETLAL APHEEYIQRH LSIVRDKIAS SGIVDQPLSP VDKTSGTEEK 840
  841 DEVPSEDVKE IISESRPAQI IKTNDNRKSQ SNKQSTGNAD QDAPHKTTKD IKEIEKKRVA 900
  901 ALKRLEEIER ILNGE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle