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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109484879, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.98
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPHCSLHATV VLLLVILKEQ PSSSAPLNGS KWTYIGPAGE KNWSKKYPSC GGLLQSPIDL  60
   61 HSDILQYDAS LAPLQFQGYN VSVEKLLNLT NDGHSVRLNL NSDMYIQGLQ PHQYRAEQLH 120
  121 LHWGNRNDPH GSEHTVSGKH FAAELHIVHY NSDLYSDFGS ASDKSEGLAV LAVLIEIGSV 180
  181 NPSYDKIFSH LQHVKYKGQQ VLIPGFNIEE LLPESPGEYY RYEGSLTTPP CYPTVLWTVF 240
  241 RNPVQISQEQ LLALETALYF THMDDPSPRE MVNNFRQVQK FDERLVYISF RQGIILSVAL 300
  301 AGVLGISIVL AVSVWLFKRK KSKKGDNKGV IYKPAIKKEA EVHA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle