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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|149034715, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METTAAAASA GGFFPSFLLL AFGTLVAAVL GAAHRLGLFY QLMHKVDKTS IRHGGESVAA  60
   61 VLRAHGVRFV FTLVGGHISP LLVACEKLGI RVVDTRHEVT AVFAADAVAR LTGTVGVAAV 120
  121 TAGPGLTNTV TAVKNAQVAQ SPVLLLGGAA STLLQKRGAL QAIDQMSLFR PLCKFCASVR 180
  181 RVRDIVPTLR AAMAAAQSGT PGPVFVELPL DVLYPYFMVE KEMIPAQLPK GLMGRVVVWY 240
  241 LQNCLANLFA GAWEPRPEGP LPLDIPQASP QQVQRCVEIL SRAKRPLLVL GSQALLPPTP 300
  301 ANKLRAAVET LGVPCFLGGM SRGLLGRNHP LHIRQNRSAA LKKADVVVLA GAVCDFRLSY 360
  361 GRVLNRKSSI IIVNRNRDDM LLNSDIFWKP QEAVQGDVGS FMIKLVEGLQ GQTWSSDWVE 420
  421 ELRKADQQKE QTYRDKALLP VPQHLNPVRL LQQVEETLPD NALLVVDGGD FVATAAYLVQ 480
  481 PRGPLRWLDP GAFGTLGVGA GFALGAKLCQ PEAEVWCLFG DGAFGYSLIE FDTFVRHKVP 540
  541 VIALVGNDAG WTQISREQVP RLGSDVACSL AYTDYHKAAM GLGAQGLILS RDNEDQVVKV 600
  601 LRDGQKLCQE GHAVVVNILI GRTDFRDGSI SV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle