YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|54035520, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTIQWAAVAS FLYAEIGLIL IFCLPFISPQ RWHKIFSFSV WTKIASFWNK AFLTIIILLV  60
   61 VLFLDAVREV KKYSSINVVE KNSASRPAAY EQAQMRLFRS QRNLYISGFS LFFWLVLRRL 120
  121 VTLITQLAKE ITNKGVLKIQ AENTNKAAKK FMEENERLKL VLKNNDNTEE HVLETENKKL 180
  181 VEDKERLKTE LKKASDALFK AQNDVMTMKI QSERLSKEYD RLLKEHSELQ NRLEKENKKG 240
  241 L

Type	Start	End	Confidence
Cytoplasmic	1	6	0.69
Transmembrane Helix	7	28	0.90
Non-Cytoplasmic	29	45	0.64
Transmembrane Helix	46	67	0.89
Cytoplasmic	68	102	0.70
Transmembrane Helix	103	122	0.71
Non-Cytoplasmic	123	241	0.72