YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	RNH1_RAT
Protein type:	Globular with Signal Peptide
Type Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRWLLPLFRT VTLAVVRVRR GVCGLGMFYA VRRGRRTGVF LSWSECKAQV DRFPAARFKK  60
   61 FATEDEAWAF VRSSSSPDGS KGQESAHVQK LQVKTSKRPR EPLGEEEEPP EPGAKHTRQD 120
  121 TEPAALVSKD AFSYMGESVV VYTDGCCSSN GRKRARAGIG VYWGPGHPLN VGIRLPGRQT 180
  181 NQRAEIHAAC KAITQAKAQN ISKLVLYTDS MFTINGITNW VQGWKKNGWR TSTGKDVINK 240
  241 EDFMELDELT QGMDIQWMHI PGHSGFVGNE EADRLAREGA KQSEG

Type	Start	End	Confidence
Signal Peptide	1	20	0.51
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	285	0.97