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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SCO2A_RAT
Protein type: Globular with Signal Peptide
Type Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAALRLLAWA FSRRVSAHRP QPTLPHHLIR HYPTTRCGKV KFYTDPVKAV EGIKDGASVM  60
   61 LGGFGLCGIP ENLIGALKTK GVKDLKIISS NVGVDDFGLG ILLASKQVRR VVCSYLGENK 120
  121 LCEQLYLAGK LELEMTPQGT LAERIRAGGT GVPAFYTPTG YGTQVQEGGV PIRYSPEGHL 180
  181 ITLSQPREVR EFEGQHHLLE RAIRADFALI KGWKADRSGN VIFRGSARNF NVPMCKAADI 240
  241 SVVEVEEIVD VGTFAPEDIH IPNIYVKRVI KGPRFEKRIE RLTTRDSPPA PGSKDQDPKR 300
  301 TRIIKRAALE FKDGMYANLG IGIPVLASNY ISPKMTVYLH SENGILGLGP FPLKKEVDPD 360
  361 IINAGKQTVT VIPGGCFFAS DDSFAMIRGG HIQLTMLGAM QVSKYGDLAN WMVPGKKVKG 420
  421 MGGAMDLVSS KKTKVVVTME HCTKTKQPKI LEKCTMPLTG KSCVDLIITE KAVFEVDRSK 480
  481 GLKLVELWEG SSLDEVKATT GCSFKVCPNL KPMQQIKSDA 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle