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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: NASP_RAT
Protein type: Globular with Signal Peptide
Type Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATESTATAA IAAELVSADK VEDAPAPSTS ADKMESLDVD SEAKKLLGLG QKHLVMGDIP  60
   61 AAVNAFQEAA SLLGKKYGET ANECGEAFFF YGKSLLELAR MENGVLGNAL EGVHVEEEEG 120
  121 EKTEDESLVE NNDNVDEEAR EELREQVYDA MGEKEAKKAE GQSLTKPETD KEQESEVEKG 180
  181 GREDMDISEP AEKLQEKVES TSKQLTESSE EAKEAAIPGL NEDEVTSGKT EQESLCTEEG 240
  241 KSISGVYVQN KEFREAVPQE EGEEMISLEK KPKETSEDQT IGAPEKQDTL MKVVEIEAEI 300
  301 DSEVKSVDVG GEEPKDQGAI SESELGKAVL MQLSGQDVEV SPVVAAEAGS EVSEKPGQEI 360
  361 TVLPNNGPVV GQSSAGDQTP SEPQNSAERL SETKDGASVE EVKAELVPEQ EEAMPPVEES 420
  421 EAAGDGVETK VAQRATEKAP EDKFKIAANE ETQERDEQMK EGEETEGSEE EDKENDKAEE 480
  481 TTNESVLEKK TLQENEEEEI GNLELAWDML DLAKIIFKRQ ETKEAQLYAA QAHLKLGEVS 540
  541 VESENYIQAV EEFQACLSLQ EQYLEAHDRL LAETHYQLGL AYGYNSQYDE AVAQFGKSID 600
  601 VIEKRMAVLL EQMKEAEGSF TEYEKEIEEL KELLPEIREK IEDAKESQRS GNVAELALKA 660
  661 TLVESSTSGF TPSGAGASVS MIASRKPTDG ASSSNCVTDI SHLVRKKRKP EEESPRKDDA 720
  721 KKAKPEPEVN GGSGDAVSSG NEVSENMEAE AENQAESQTT AEGTVDSAAT VKSTAC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle