YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|157822085, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.43
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAAWPAGRA SPAAGPPALL RTLWLVTVAA GHCGAAASGA VGGEETPKCE DLRVGQYICK  60
   61 EPKINDATQE PVNCTNYTAH VQCFPAPNIT CKDLSGNETH FTGSEVGFLK PISCRNVNGY 120
  121 SYKVAVALSL FLGWLGADRF YLGYPALGLL KFCTVGFCGI GSLIDFVLIS MQIVGPSDGS 180
  181 SYIIDYYGTR LTRLSVTNET FRKTQLYP

Type	Start	End	Confidence
Signal Peptide	1	37	0.77
N-region	1	28
H-region	29	34
C-region	35	37
Cleavage Site	37	38
Non-Cytoplasmic	38	208	0.73