YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|34882922
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPEEGRPYPW VRWSWSAFQR LLPWLLMVII AICWWLLCGG HLSKPQHVLL EPPELHVAEL  60
   61 QLNLTDPQKD LTLRWGAGPA LGRSFTHGPG LEKGNLRIHQ DGIYRLHIQV TLANCSSSGS 120
  121 ALQHRASLVV GICSPAVHSI SLLRRRFGQD CTVSLQRLTP LARGDVLCSN LTQPLLPSRN 180
  181 ADETFFGVQR VYPWP

Type	Start	End	Confidence
Cytoplasmic	1	20	0.80
Transmembrane Helix	21	42	0.92
Non-Cytoplasmic	43	195	0.77