YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57528407, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASWQHQGRT LFLLALLGGV SGLRECLILQ SVKGSTVSCH GPTEFPSSLP ADTVHLSVEF  60
   61 SSLTQLPAAA LQGCPGLQEL HLSSNRLQEL SPGLLAPVPR LRVLDLTRNA LRSLPPGLFR 120
  121 SSAALNTLVL RENQLQEASA RWLQGLDALG YLDLAENRLR SLPARLLANL GALHTLDLGH 180
  181 NLLESLPEGF LRGPRRLQRL HLEGNRLQRL EAGLLAPQPF LGVLFLNDNQ LTAVAADSFR 240
  241 GLKQLDMLDL SNNSLSSTPP GLWAFLGRPT RDMQDGFDVS HNPWVCDKDL VDLCRWLAAN 300
  301 RHKMFSQNDT LCAGPEAVRG QRLLDVAELG TL

Type	Start	End	Confidence
Signal Peptide	1	22	0.99
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	332	0.99