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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ACBG2_RAT
Protein type: Transmembrane
Type Confidence: 0.57
Topology Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTQEKKAEDP DRGMDTTSAA PRLWSTHCDG EVLLRLSKHG PGHETPMTIP ELFQESVERF  60
   61 GAYPALASKN GKKWDTLTFS QYYDVCRKAA RSLIKLGLQR FHGVGILGFN SVEWVVAALG 120
  121 AILAGGLCVG IYATNSAEAC QYVIKQANVN VLIVENDQQL QKILSIPPDK METVKAIVQY 180
  181 RLPLMENSTN LYSWQDFMEL GNAIPNIQLD RVILSQKANQ CAVIIYTSGT TGSPKGVMLS 240
  241 HDNITWTAGA MAREIELIHV SGKQDTIVSY LPLSHIAAQL MDIWIPIKVG VLTFFAQPDA 300
  301 LRGTLVYTLQ EVKPTYFLGV PRVWEKMQDT IKENVAKSSN LRKKAFAWAK MLGLKVNTKK 360
  361 MLGKRDIPMN YRMAKALVFT KVRTSLGLDN CHTFFSGASP LSQDVSEFFL SLDIPIGEIY 420
  421 GMTECSGPHT VSCKSIYRVL SCGKVLNGCK NMLYKQNKDG VGEVCMWGRH VFMGYLGKED 480
  481 ATLEVLDEDG WLHSGDIGRL DSHDFLYITG RIKEVLITAG GENIWPIPIE TLVKEKIPII 540
  541 SHAMLVGDKA KFLSMLLTLK CETDQMSGEP LDKLNLEAIS FCQMLGSQAV TVSDILKIRD 600
  601 PVVYTAIQYG IDIVNQQAVS DSHRIRKWII LEKDFSIQGG ELGPTSKLKR DLITQKYKAQ 660
  661 IDNMYSS

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