YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SIAT2_RAT
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKPHLKQWRQ RMLFAIFVWG LLFLAIFIYF TNSNPAAPMP SSFSFLESRG LLPVQGKQRV  60
   61 IMGALQEPSL PRSLEPSKVL MDGHSASPFN SWPGDPQKGD QAQDGFDNGD EFFTSQVGRK 120
  121 SQSAFYPEED NYFFVAGQPG LYHHRQGALG LPSPGESSWQ SGPGQPKQEK LRHPRRGSLP 180
  181 EEAYDSDMLS TSMSRAFLYR LWKGTVSSKM LNPRLQKAMR YYMSFNKHGV RFSRRGRREA 240
  241 RRTGPELLCE MRKRVRVRTL DGKEAPFSGL GWRPLVPGVP LSQLHPRGLR SCAVVMSAGA 300
  301 ILNSSLGEEI DSHDAVLRFN SAPTRGYEKD VGNKTTVRII NSQILANPSH HFIDSSLYKD 360
  361 VILVAWDPAP YSANLNLWYK KPDYNLFTPY IQHRLKYPTQ PFYILHPKFI WQLWDIIQEN 420
  421 TREKIQPNPP SSGFIGILVM MSMCQEVHVY EYIPSVRQTE LCHYHELYYD AACTLGAYHP 480
  481 LLYEKLLVQR LNTGTQADLH HKGKVVLPGF QTLRCPVTRP NNTNT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle