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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|34868416, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATSTAPGGG GAGAVHSSNA SGLAFDSGLE IRTRSVEQTL LPLVSQITTL INHKDNTKKS  60
   61 DKTLQAIQRV GQAVNLAVGR FVKVGEAIAN ENWDLKEEIS IACIEAKQAG ETIASLTDVT 120
  121 KWNHLESDGQ VTILTDKTGV VQAARLLLSS VTKVLLLADQ VVIKQIVTSR NKVLATMERL 180
  181 ERVNSFQEFV QIFSQFGNEM VEFAYLTGDR QNDLKDEKKK ARMAVARAVL EKGTMMLLTA 240
  241 SKTCLRHPSC ESAHKNKEGV FDRMRAALEK VIEIVTDCRL NRDTDSSSVS IFTGIKELKL 300
  301 NMEALRENVY FESKENLSAA LEVILERVED FTDSAYTSHE HRERILELSA QARTEVQQFI 360
  361 SVWMQAQSRK TKSAAEELEL TVLKVSHSLD ELRKELHCTA MQLAADLLKF HADHVVLKAL 420
  421 KVTGVEGNLE ALAEYACKLS EQKEQLVETC RLLRHVSGTE PLEITCMHAE ETFQVTGQQI 480
  481 ISAAETLTLH PSSKIAKENL DVFCEAWESQ ISDLATLLRE ISDVFEGRRG EKYDHLSLPK 540
  541 PMKNNANLKS VKSDKPDSEE QAKIAKLGLK LGLLSSDADC EIEKWEDDDN EIVRHGRNMS 600
  601 RMAYSLYLFT RGEGPLKTSQ DLIHFLEVFA TEGLKLTSSI QSFSKQLKDD DKLMLLLEIN 660
  661 KLIPLCHQLQ TITKTSLQSK VFLKVDKCVT KIRSMMTLVV QLLSLCYKLL KKMGNDRWVS 720
  721 ATNKDAMDGQ T

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle