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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SRPX2_RAT
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTGSLTQRG ALLLLLLLAP AVTPTWYAGS GYSPDESYNE VYAEEVPDTR ALDYRVPRWC  60
   61 YTLNIQDGEA TCYSPRGGNY HSSLGTRCEL SCDRGFRLIG RKSVQCLPSR RWSGTAYCRQ 120
  121 MRCHTLPFIT SGTYTCTNGM LLDSRCDYSC SSGYHLEGDR SRICMEDGRW SGGEPVCVDI 180
  181 DPPKIRCPHS REKIAEPEKL TARVYWDPPL VKDSADGTIT RVTLRGPEPG SHFPEGEHVI 240
  241 RYTAYDRAYN RASCKFIVKV QVRRCPILKP PQHGYLTCSS AGDNYGAICE YHCDGGYERQ 300
  301 GTPSRVCQSS RQWSGSPPVC TPMKINVNVN SAAGLLDQFY EKQRLLIVSA PDPSNRYYKM 360
  361 QISMLQQSTC GLDLRHVTII ELVGQPPQEV GRIREQQLSA GIIEELRQFQ RLTRSYFNMV 420
  421 LIDKQGIDRE RYMEPVTPEE IFTFIDDYLL SNQELARRAE QRDVCE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle