YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CL2DB_RAT
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAKKASQPM LNTTGSLQEG EMGKMFHGKC LRIVSPESPA KLYCCYGVIM VLSVAVVALS  60
   61 VALSVKMTPQ ISTINTYAAC PRNWIGVGNK CFYFSEYASN WTFSQTFCKA QEAELARFDT 120
  121 EEELNFLSRY KGSFDYWIGL HRESSEHPWK WTDNTQYNYS LSIRGVERYA YLNDIGISSA 180
  181 RVYADKRWSC SKLNSYSLQC KTPFSPM

Type	Start	End	Confidence
Cytoplasmic	1	41	0.92
Transmembrane Helix	42	63	0.92
Non-Cytoplasmic	64	207	0.95