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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|157823591, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGARAAAAA SAGSTASSGS PPPQEPGLWE LLEEFSRTQY RAKDSGGKSG SKVELIEKRC  60
   61 LELFGRDYCF SVIPNVNGDI CGHYPRHIVF LEYESSEKEK DTFQSTVQVN KLQDLIHRSK 120
  121 MARCRGRFVC PVILFKGKHI CRSATLAGWG ELYGRSGYNY FFSGGADDTW ANTEDVTEED 180
  181 FVLRSGDTHL FDKVRGYDIK LLQYLSVKYI CDLMVENKKV KFGMNVTSSE KVDKAQRYAN 240
  241 FTLLSIPYPG CEFFKEYKDR DYMAEGLIFN WKQDYVDAPL NIPDFLTQSL NIDWSQYQSW 300
  301 DLVQQTQNYL KLLLFIMNRD DDHGLLVHCI SGWDRTPLFI SLLRLSLWAD GLIHTSLKPA 360
  361 EILYLTVAYD WFLFGHMLVD RLSKGEEIFF FCFNFLKHIT SEEFCLKTQR RKSLPTRDAG 420
  421 FTVEDICMLR HRDRGSTTSL GSDFSLVLEH SPGAVGSFSY EAVELVPAGA PTQAAWRKSH 480
  481 SSSPQSMLWS RPQPSDDRLP SHHGFTEAKS SSSSSSNHSD NFFRMGSSPL EVPKPRSVDH 540
  541 PLPGSSLSTD FGSWQMVSGC GSIQERPVLH TDSSLPFSFQ DELPNSCLLT ALSDRETRLQ 600
  601 EVRSAFLAAY SSTVRLRAAA PSPSGAIGGL LEQFARGVGL RGTSTSAL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle