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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|34933169, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPVGMQAPQW LLLLLLILPT TGSDPVLCFT QYEEPSGRCK GLLGRDIRVE DCCLNTAYAF  60
   61 QEHDGGLCQS CRSPQWSAWS SWGPCSVTCS EGSQLRHRRC VGRGGQCSEK AAPGTLEWQL 120
  121 QACEDQLCCP EMGGWSEWGP WGPCSVTCSK GTQTRQRLCD NPAPKCGGHC PGEAQQSQAC 180
  181 DTQKICPTHG AWASWGPWSA CSGSCLGGAQ EPKETRSRSC SAPAPSHQPP GKPCSGTAYE 240
  241 HRGCSGLPPC PVAGGWGPWG PSSPCPVTCG LGQTLERRTC DHPVPRHGGP FCAGDATRKH 300
  301 VCNTAMPCPV NGEWEAWGKW SHCSRVRMKS ISCDEIPGQQ SRSRSCGGRK FDGQPCTGKL 360
  361 QDIRHCYDIH NCVLKGSWSQ WSTWGLCTPP CGPNPTRVRQ RLCTPLLPKY SPTVSMVEGQ 420
  421 GEKNVTFWGI PRPLCEVLQG QKLVVEEKRP CLHVPSCRDP EEKKP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle