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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: TMM43_RAT
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.23
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAANYSSTGS RKEHVKVTSD PQPGFLERLS ETSGGMFVGL VTFLLSFYLI FTNEGRALKT  60
   61 ANLLAEGLSL VVSPDSIHSV APENEGRLVH IIGALRTSKL LSDPNYGVHL PAVKLRRHVE 120
  121 MYQWVETEES NEYTEDGQVK KETKYSYNTE WRSEIVSSKN FDREIGHKNP SAMAVESFTA 180
  181 TAPFVQIGRF FLSAGLIDKI DNFKPLSLAK LEDPHVDIIR RGDFFYHSEN PKYPEVGDVR 240
  241 VSFSYAGLSS DDPDLGPAHV VTVIARQRGD QLIPYSTKSG DTLLLLHHGD FSAEEVFRRE 300
  301 QKSNSMKTWG LRAAGWMAMF MGLNLMTRIL YTLVDWFPVF RDLVNIGLKA FAFCVATSLT 360
  361 LLTVAAGWLF YRPLWAALLG CLALVPIIIA RTRVPTKKLE 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle