YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|75516455, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLRQFLMCL SLCTAFALSK PTEKKDRVHH EPQLSDKVHN DAQNFDYDHD AFLGAEEAKS  60
   61 FDQLTPEESK ERLGMIVDKI DTDKDGFVTK GELKSWIKHA QKKYIYDNVE NQWQEFDMNQ 120
  121 DGLISWDEYR NVTYGTYLDD PDPDDGFNYK QMMVRDERRF KMADKDGDLI ATKEEFTAFL 180
  181 HPEEYDYMKD IVVQETMEDI DKNADGFIDL EEYIGDMYSH DGNADEPEWV KTEREQFVEF 240
  241 RDKNRDGKMD KEETKDWILP SDYDHAEAEA RHLVYESDQD KDGKLTKEEI VDKYDLFVGS 300
  301 QATDFGEALV RHDEF

Type	Start	End	Confidence
Signal Peptide	1	19	0.95
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	315	0.99